Publications

Greg Gibson

DICER1 and microRNA Regulation in Post-traumatic Stress Disorder with Comorbid Depression
Wingo AP, Almli LM, Stevens JJ, Klengel T, Uddin M, Li Y, Bustamante AC, Lori A, Koen N, Stein DJ, Smith AK, Aiello AE, Koenen KC, Wildman DE, Galea S, Bradley B, Binder EB, Jin P, Gibson G, Ressler KJ
Nature Communications

PLOS Genetics Data Sharing Policy: In Pursuit of Functional Utility
Barsh GS, Cooper GM, Copenhaver GP, Gibson G, McCarthy MI, Tang H, Williams SM
Plos Genetics

PART of the WHOLE: A Case Study in Wellness-oriented Personalized Medicine
Gibson G, Marigorta UM, Ojagbeghru ER, Park S
Yale Jouranal of Biology and Medicine

Omic Personality: Implications of Stable Transcript and Methylation Profiles for Personalized Medicine.
Tabassum R, Sivadas A, Agrawal V, Tian H, Arafat D, Gibson G.
Genome Med

Expression Quantitative Trait Locus Analysis for Translational Medicine
G Gibson, JE Powell, UM Marigorta
Genome Medicine


King Jordan

A Combined Evidence Bayesian Method for Human Ancestry Inference Applied to Afro-Colombians.
Rishishwar L, Conley AB, Vidakovic B, Jordan IK
Gene

Transcriptional Profiling of Interleukin-2-primed Human Adipose Derived Mesenchymal Stem Cells Revealed Dramatic Changes in Stem Cells Response Imposed by Replicative Senescence
Niu P, Smagul A, Wang L, Sadvakas A, Sha Y, Pérez LM, Nussupbekova A, Amirbekov A, Akanov AA, Gálvez BG, Jordan IK, Lunyak VV.
                                                Oncotarget


Melissa Kemp

Trans-spliced Cas9 Allows Cleavage of HBB and CCR5 Genes in Human Cells using Compact Expression Cassettes
Fine EJ, Appleton CM, White DE, Brown MT, Deshmukh H, Kemp ML, Bao G.
Sci Rep.

Quantitative Multivariate Analysis of Dynamic Multicellular Morphogenic Trajectories
White DE, Sylvester JB, Levario TJ, Lu H, Streelman JT, McDevitt TC, Kemp ML.
Integr Biol (Camb)


Joseph Lachance

Whole Genome Sequence Analyses of Western Central African Pygmy Hunter-Gatherers Reveal a Complex Demographic History and Identify Candidate Genes Under Positive Natural Selection
PH Hsieh, KR Veeramah, J Lachance, SA Tishkoff, JD Wall, MF Hammer, RN Gutenkunst
bioRxiv


Patrick McGrath

A High-throughput Device for Size Based Separation of C. elegans Developmental Stages
Ai X, Zhuo W, Liang Q, McGrath PT, Lu H.
Lab Chip


Annalise Paaby

Wild Worm Embryogenesis Harbors Ubiquitous Polygenic Modifier Variation
Paaby, A.B., A.G. White, D.D. Riccardi, K.C. Gunsalus, F. Piano and M.V. Rockman - 
eLife 


Peng Qiu

COSMID: A Web-based Tool for Identifying and Validating CRISPR/Cas Off-target Sites
TJ Cradick, P Qiu, CM Lee, EJ Fine, G Bao
Molecular Therapy


Todd Streelman

Developmental Plasticity of Patterned and Regenerating Oral Organs
JT Streelman, RF Bloomquist, TE Fowler
Current Topics in Developmental Biology

Quantitative Multivariate Analysis of Dynamic Multicellular Morphogenic Trajectories
DE White, JB Sylvester, TJ Levario, H Lu, JT Streelman, TC Mcdevitt, Kemp ML
Integrative Biology


Fred Vannberg

Genetic Variants of MARCO are Associated with Susceptibility to Pulmonary Tuberculosis in a Gambian Population
NA Lack, DME Bowdish, K Sakamoto, PC Hill, G Sirugo, MJ Newport, S Gordon, A Hill, FO Vannberg
BioMed Centra


Eberhard Voit

From within Host Dynamics to the Epidemiology of Infectious Disease: Scientific Overview and Challenges.
Gutierrez JB, Galinski MR, Cantrell S, Voit EO
Math Biosci.

Computational Inference of the Structure and Regulation of the Lignin Pathway in Panicum Virgatum
Faraji M, Fonseca LL, Escamilla-Treviño L, Dixon RA, Voit EO
Biotechnol Biofuels


May Wang

Models for Predicting Stage in Head and Neck Squamous Cell Carcinoma using Proteomic and Transcriptomic Data
C Kaddi, M Wang
IEEE

A Semi-Supervised Method for Predicting Cancer Survival Using Incomplete Clinical Data
HR Hassanzadeh, JH Phan, MD Wang
arXiv


Soojin Yi

Genes Located in a Chromosomal Inversion are Correlated with Territorial Song in White-throated Sparrows
Zinzow-Kramer, W. M., Horton, B. M., McKee, C. D., Michaud, J. M., Tharp, G. K., Thomas, J. W., Tuttle, E. M., Yi, S. V., Maney, D
Genes, Brain and Behavior

Impacts of Chromatin States and Long-range Genomic Segments on Aging and DNA Methylation
Sun, D., Yi, S. V.
Plos One